Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudovibrio axinellae Ad2 (GCF_001623255.1)

Found 22 curated entries in PaperBLAST's database that match '2.7.1.59' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pseudovibrio axinellae Ad2, or try another query

PsAD2_RS04120 PsAD2_00841 WP_068002575.1: BadF/BadG/BcrA/BcrD ATPase family protein
is similar to:
PaperBLAST

SMc02875: N-acetylglucosamine kinase (EC 2.7.1.59) from Sinorhizobium meliloti

41% id,
98% cov

SO3507: N-acetylglucosamine kinase (EC 2.7.1.59) from Shewanella oneidensis

35% id,
94% cov

Shewana3_3114: N-acetylglucosamine kinase (EC 2.7.1.59) from Shewanella sp.

35% id,
94% cov

More...

PsAD2_RS21780 PsAD2_04363 WP_068010615.1: ROK family protein
is similar to:
PaperBLAST

NAGK_ECOLI / P75959: N-acetyl-D-glucosamine kinase; GlcNAc kinase; EC 2.7.1.59 from Escherichia coli
YcfX / b1119: N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli
nagK / GB|ABB62126.1: N-acetyl-D-glucosamine kinase; EC 2.7.1.59 from Escherichia coli
nagK / P75959: N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli

40% id,
99% cov

NAGK_SALTY / Q8ZPZ9: N-acetyl-D-glucosamine kinase; GlcNAc kinase; EC 2.7.1.59 from Salmonella typhimurium

40% id,
99% cov

AGAK_SHESA / A0KYQ6: N-acetylgalactosamine kinase AgaK; GalNAc kinase; N-acetylglucosamine kinase; GlcNAc kinase; EC 2.7.1.-; EC 2.7.1.59 from Shewanella sp.

38% id,
96% cov

More...

PsAD2_RS05040 PsAD2_01025 WP_068003245.1: ROK family protein
is similar to:
PaperBLAST

NAGK_ECOLI / P75959: N-acetyl-D-glucosamine kinase; GlcNAc kinase; EC 2.7.1.59 from Escherichia coli
YcfX / b1119: N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli
nagK / GB|ABB62126.1: N-acetyl-D-glucosamine kinase; EC 2.7.1.59 from Escherichia coli
nagK / P75959: N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli

39% id,
99% cov

NAGK_SALTY / Q8ZPZ9: N-acetyl-D-glucosamine kinase; GlcNAc kinase; EC 2.7.1.59 from Salmonella typhimurium

39% id,
99% cov

AGAK_SHESA / A0KYQ6: N-acetylgalactosamine kinase AgaK; GalNAc kinase; N-acetylglucosamine kinase; GlcNAc kinase; EC 2.7.1.-; EC 2.7.1.59 from Shewanella sp.

35% id,
96% cov

PsAD2_RS05310 PsAD2_01079 WP_068003429.1: ROK family protein
is similar to:
PaperBLAST

CA265_RS11300: N-acetylglucosamine kinase (EC 2.7.1.59) from Pedobacter sp.

21% id,
84% cov

PsAD2_RS12865 PsAD2_02610 WP_068006520.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

CA265_RS11300: N-acetylglucosamine kinase (EC 2.7.1.59) from Pedobacter sp.

20% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

6912-8072 (frame -2) on NZ_LMCB01000022.1 Pseudovibrio axinellae strain Ad2 AD2_contig000022, whole genome shotgun sequence
is similar to:
PaperBLAST

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis
Also see hits to annotated proteins above

29% id,
53% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory