Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudovibrio axinellae Ad2 (GCF_001623255.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.2.1' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudovibrio axinellae Ad2, or try another query

PsAD2_RS00020 PsAD2_00004 WP_068000287.1: acetate kinase
is similar to:
PaperBLAST

ACKA_THEMA / Q9WYB1: Acetate kinase; Acetokinase; EC 2.7.2.1 from Thermotoga maritima
ackA / PDB|2IIR_A: acetate kinase; EC 2.7.2.1 from Thermotoga maritima
Q9WYB1: acetate kinase (EC 2.7.2.1) from Thermotoga maritima

48% id,
99% cov

ACKA_BACSU / P37877: Acetate kinase; Acetokinase; EC 2.7.2.1 from Bacillus subtilis

45% id,
99% cov

ACKA_ECOLI / P0A6A3: Acetate kinase; Acetokinase; EC 2.7.2.1 from Escherichia coli
AckA / b2296: acetate kinase (EC 2.7.2.15; EC 2.7.2.1; EC 2.7.2.7; EC 2.7.2.14) from Escherichia coli
ackA / RF|NP_416799: acetate kinase; EC 2.7.2.1 from Escherichia coli
P0A6A5: acetate kinase (EC 2.7.2.1) from Escherichia coli
P0A6A3: acetate kinase (EC 2.7.2.1) from Escherichia coli

44% id,
99% cov

More...

PsAD2_RS14055 PsAD2_02848 WP_068006986.1: acetate/propionate family kinase
is similar to:
PaperBLAST

A2RNG4: acetate kinase (EC 2.7.2.1) from Lactococcus lactis

37% id,
100% cov

B2RK02: acetate kinase (EC 2.7.2.1) from Porphyromonas gingivalis

38% id,
97% cov

YhaA / b3115: propionate kinase (EC 2.7.2.7; EC 2.7.2.1; EC 2.7.2.15; EC 2.7.2.14) from Escherichia coli

38% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory