Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudovibrio axinellae Ad2 (GCF_001623255.1)

Found 17 curated entries in PaperBLAST's database that match '3.1.1.25' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudovibrio axinellae Ad2, or try another query

PsAD2_RS03450 PsAD2_00703 WP_068002255.1: SMP-30/gluconolactonase/LRE family protein
is similar to:
PaperBLAST

Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp.

32% id,
93% cov

AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens

29% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory