Searching in Pseudovibrio axinellae Ad2 (GCF_001623255.1)
Found 15 curated entries in PaperBLAST's database that match '4.1.2.55' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudovibrio axinellae Ad2, or try another query
| eda PsAD2_RS03420 PsAD2_00697 WP_068002240.1: bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase is similar to: | PaperBLAST |
Kga / b1850: KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli | 47% id, 94% cov |
kdgA / P38448: 2-dehydro-3-deoxy-D-gluconate-6-phosphate aldolase (EC 4.1.2.55) from Dickeya dadantii | 47% id, 94% cov |
TM0066 / Q9WXS1: 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16; EC 4.1.2.55) from Thermotoga maritima | 33% id, 95% cov |
| PsAD2_RS15490 PsAD2_03138 WP_068007795.1: dihydrodipicolinate synthase family protein is similar to: | PaperBLAST |
KDGA_SACSO / O54288: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.55 from Saccharolobus solfataricus | 26% id, 98% cov |
KDGA_SACS2 / Q97U28: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.55 from Saccharolobus solfataricus | 26% id, 94% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 11210-12148 (frame +2) on NZ_LMCB01000032.1 Pseudovibrio axinellae strain Ad2 AD2_contig000032, whole genome shotgun sequence is similar to: | PaperBLAST |
KDGA_SACS2 / Q97U28: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.55 from Saccharolobus solfataricus | 26% id, 98% cov |
Lawrence Berkeley National Laboratory