Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudovibrio axinellae Ad2 (GCF_001623255.1)

Found 4 curated entries in PaperBLAST's database that match '5.3.3.7' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudovibrio axinellae Ad2, or try another query

PsAD2_RS13785 PsAD2_02794 WP_068006840.1: 4-oxalomesaconate tautomerase
is similar to:
PaperBLAST

ADI1 / A0A0U2X0E4: aconitate-Δ-isomerase 1 (EC 5.3.3.7) from Ustilago maydis

39% id,
79% cov

Q8EJW4: aconitate DELTA-isomerase (EC 5.3.3.7) from Shewanella oneidensis

30% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory