Curated BLAST for Genomes

 

Curated BLAST

Searching in Brevundimonas sp. GW460-12-10-14-LB2 (GCF_001636925.1)

Found 6 curated entries in PaperBLAST's database that match 'hisH' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Brevundimonas sp. GW460-12-10-14-LB2, or try another query

hisH A4249_RS10705 A4249_10710 WP_066552534.1: imidazole glycerol phosphate synthase subunit HisH
is similar to:
PaperBLAST

HIS5_ECOLI / P60595: Imidazole glycerol phosphate synthase subunit HisH; IGP synthase glutaminase subunit; IGP synthase subunit HisH; ImGP synthase subunit HisH; IGPS subunit HisH; EC 4.3.2.10; EC 3.5.1.2 from Escherichia coli
HisH / b2023: imidazole glycerol phosphate synthase subunit HisH (EC 4.3.2.10) from Escherichia coli
hisH / P60595: imidazole glycerol phosphate synthase subunit HisH (EC 4.3.2.10) from Escherichia coli

43% id,
99% cov

HIS5_MYCBO / P59957: Imidazole glycerol phosphate synthase subunit HisH; IGP synthase glutaminase subunit; IGP synthase subunit HisH; ImGP synthase subunit HisH; IGPS subunit HisH; EC 4.3.2.10; EC 3.5.1.2 from Mycobacterium bovis

38% id,
97% cov

HIS5_THET8 / Q7SIC0: Imidazole glycerol phosphate synthase subunit HisH; IGP synthase glutaminase subunit; IGP synthase subunit HisH; ImGP synthase subunit HisH; IGPS subunit HisH; EC 4.3.2.10; EC 3.5.1.2 from Thermus thermophilus

35% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory