Curated BLAST for Genomes

 

Curated BLAST

Searching in Nocardioides dokdonensis FR1436 (GCF_001653335.1)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.150' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 18 relevant proteins in Nocardioides dokdonensis FR1436, or try another query

I601_RS19165 I601_3873 WP_084527856.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 44% id,
97% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 44% id,
95% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 41% id,
98% cov

More...

I601_RS17105 I601_3454 WP_068112391.1: crotonase/enoyl-CoA hydratase family protein
is similar to:		 PaperBLAST

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 36% id,
97% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 34% id,
100% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 33% id,
98% cov

More...

I601_RS08400 I601_1696 WP_068108168.1: crotonase/enoyl-CoA hydratase family protein
is similar to:		 PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 34% id,
95% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 34% id,
95% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 32% id,
97% cov

More...

I601_RS10740 I601_2179 WP_068109313.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 33% id,
97% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 31% id,
98% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 31% id,
98% cov

More...

I601_RS17450 I601_3523 WP_068112550.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 33% id,
95% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 30% id,
96% cov

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

 30% id,
84% cov

More...

I601_RS00820 I601_0169 WP_068105229.1: crotonase/enoyl-CoA hydratase family protein
is similar to:		 PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 30% id,
98% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 30% id,
96% cov

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

 27% id,
85% cov

More...

I601_RS16330 I601_3297 WP_068112038.1: enoyl-CoA hydratase/isomerase family protein
is similar to:		 PaperBLAST

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

 36% id,
81% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 33% id,
85% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 33% id,
85% cov

More...

I601_RS07415 I601_1498 WP_218917771.1: crotonase/enoyl-CoA hydratase family protein
is similar to:		 PaperBLAST

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 33% id,
86% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 33% id,
86% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 32% id,
88% cov

More...

I601_RS17540 I601_3541 WP_068112585.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:		 PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 31% id,
91% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 32% id,
75% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 30% id,
78% cov

More...

I601_RS07275 I601_1470 WP_068107807.1: 1,4-dihydroxy-2-naphthoyl-CoA synthase
is similar to:		 PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 31% id,
92% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 30% id,
91% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 29% id,
92% cov

I601_RS03060 I601_0620 WP_068106287.1: enoyl-CoA hydratase
is similar to:		 PaperBLAST

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 30% id,
92% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 38% id,
25% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 33% id,
25% cov

More...

I601_RS16810 I601_3394 WP_068112257.1: enoyl-CoA hydratase/isomerase family protein
is similar to:		 PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 32% id,
87% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 27% id,
91% cov

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

 27% id,
74% cov

More...

I601_RS11365 I601_2304 WP_068109617.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 26% id,
98% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 26% id,
98% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 25% id,
97% cov

More...

I601_RS05525 I601_1115 WP_068107229.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:		 PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 34% id,
73% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 32% id,
71% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 31% id,
72% cov

More...

I601_RS06095 I601_1230 WP_068107421.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 28% id,
83% cov

I601_RS19315 I601_3903 WP_068113410.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:		 PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

 30% id,
53% cov

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

 34% id,
43% cov

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

 32% id,
18% cov

I601_RS04220 I601_0852 WP_068106815.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:		 PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

 36% id,
43% cov

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

 39% id,
14% cov

I601_RS05035 I601_1017 WP_068107058.1: crotonase/enoyl-CoA hydratase family protein
is similar to:		 PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

 28% id,
35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 18 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1111807-1114938 (frame -2) on NZ_CP015079.1 Nocardioides dokdonensis FR1436 chromosome, complete genome
is similar to:		 PaperBLAST

Q9Y232: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Homo sapiens
Also see hits to annotated proteins above

 26% id,
44% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory