Curated BLAST for Genomes

 

Curated BLAST

Searching in Nocardioides dokdonensis FR1436 (GCF_001653335.1)

Found 17 curated entries in PaperBLAST's database that match '5.3.1.7' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Nocardioides dokdonensis FR1436, or try another query

I601_RS18510 I601_3740 WP_084527824.1: SulP family inorganic anion transporter
is similar to:
PaperBLAST

MANI_THEFU / A0A077LPS9: D-mannose isomerase; EC 5.3.1.7 from Thermobifida fusca

33% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory