Curated BLAST for Genomes

 

Curated BLAST

Searching in Hafnia paralvei ATCC 29927 (GCF_001655005.1)

Found 119 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 94 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Hafnia paralvei ATCC 29927, or try another query

fbaA M988_RS16965 M988_3417 WP_004846864.1: class II fructose-bisphosphate aldolase
is similar to:
PaperBLAST

D0ZEE4: fructose-bisphosphate aldolase (EC 4.1.2.13) from Vibrio anguillarum

92% id,
100% cov

ALF_ECOLI / P0AB71: Fructose-bisphosphate aldolase class 2; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; Fructose-bisphosphate aldolase class II; Sedoheptulose bisphosphate aldolase; EC 4.1.2.13 from Escherichia coli
Fda / b2925: fructose-bisphosphate aldolase class II (EC 4.1.2.13) from Escherichia coli
fbaA / RF|NP_417400: fructose-bisphosphate aldolase class II; EC 4.1.2.13 from Escherichia coli
fbaA / P0AB71: fructose-bisphosphate aldolase class II (EC 4.1.2.13) from Escherichia coli

91% id,
100% cov

A0KGD4: fructose-bisphosphate aldolase (EC 4.1.2.13) from Aeromonas hydrophila

82% id,
99% cov

More...

fbaB M988_RS08370 M988_1683 WP_064573648.1: class I fructose-bisphosphate aldolase
is similar to:
PaperBLAST

ALF1_ECOLI / P0A991: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Escherichia coli
DhnA / b2097: fructose-bisphosphate aldolase class I (EC 4.1.2.13) from Escherichia coli
fbaB / P0A991: fructose-bisphosphate aldolase class I (EC 4.1.2.13) from Escherichia coli

88% id,
100% cov

ALF1_HALS3 / B0R3Y0: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Halobacterium salinarum

26% id,
95% cov

ALF1_THETK / P58315: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; FBPA; EC 4.1.2.13 from Thermoproteus tenax

33% id,
64% cov

More...

M988_RS18375 M988_3705 WP_008814762.1: class II fructose-bisphosphate aldolase
is similar to:
PaperBLAST

I3EBM6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Bacillus methanolicus

45% id,
100% cov

Q5HE75: fructose-bisphosphate aldolase (EC 4.1.2.13) from Staphylococcus aureus

43% id,
100% cov

ALF_BACSU / P13243: Probable fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Bacillus subtilis

42% id,
100% cov

More...

M988_RS15845 M988_3191 WP_004090757.1: tagatose bisphosphate family class II aldolase
is similar to:
PaperBLAST

I3EBM6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Bacillus methanolicus

44% id,
100% cov

ALF_BACSU / P13243: Probable fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Bacillus subtilis

44% id,
100% cov

Q9RHA2: fructose-bisphosphate aldolase (EC 4.1.2.13) from Thermus aquaticus

42% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory