Curated BLAST for Genomes

 

Curated BLAST

Searching in Hafnia paralvei ATCC 29927 (GCF_001655005.1)

Found 15 curated entries in PaperBLAST's database that match '5.3.1.14' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Hafnia paralvei ATCC 29927, or try another query

M988_RS14420 M988_2907 WP_064574663.1: L-rhamnose isomerase
is similar to:
PaperBLAST

RHAA_ECOLI / P32170: L-rhamnose isomerase; RhamIso; EC 5.3.1.14 from Escherichia coli
RhaA / b3903: L-rhamnose isomerase (EC 5.3.1.14) from Escherichia coli
rhaA / P32170: L-rhamnose isomerase (EC 5.3.1.14) from Escherichia coli
P32170: L-rhamnose isomerase (EC 5.3.1.14) from Escherichia coli

85% id,
100% cov

BWI76_RS00675: L-rhamnose isomerase (EC 5.3.1.14) from Klebsiella michiganensis

84% id,
100% cov

L7VQ35: L-rhamnose isomerase (EC 5.3.1.14) from Thermoclostridium stercorarium

57% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory