Curated BLAST for Genomes

 

Curated BLAST

Searching in Dietzia timorensis ID05-A0528 (GCF_001659785.1)

Found 37 curated entries in PaperBLAST's database that match '1.2.1.88' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Dietzia timorensis ID05-A0528, or try another query

BJL86_RS04135 A9D54_0833 WP_067472237.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

35% id,
89% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

32% id,
94% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

32% id,
94% cov

More...

BJL86_RS03515 A9D54_0709 WP_067474579.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

33% id,
92% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

31% id,
94% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

32% id,
92% cov

More...

BJL86_RS01995 A9D54_0405 WP_006897513.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

33% id,
93% cov

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

33% id,
90% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

32% id,
92% cov

More...

BJL86_RS15820 A9D54_3195 WP_075845098.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q9RW56: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Deinococcus radiodurans

32% id,
94% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

30% id,
92% cov

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

30% id,
92% cov

More...

BJL86_RS10335 A9D54_2074 WP_067474647.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

33% id,
92% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

35% id,
86% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

34% id,
86% cov

More...

BJL86_RS04650 A9D54_0939 WP_067475737.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q9RW56: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Deinococcus radiodurans

32% id,
91% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

33% id,
89% cov

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

31% id,
92% cov

More...

BJL86_RS12290 A9D54_2464 WP_067477782.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

32% id,
92% cov

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

32% id,
92% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

30% id,
92% cov

More...

BJL86_RS03075 A9D54_0621 WP_067477518.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

32% id,
90% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

30% id,
90% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

30% id,
89% cov

More...

BJL86_RS12160 A9D54_2438 WP_067472829.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

31% id,
95% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

31% id,
92% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

29% id,
92% cov

More...

BJL86_RS00895 A9D54_0184 WP_067475290.1: succinic semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

29% id,
89% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

30% id,
85% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

29% id,
89% cov

More...

BJL86_RS12540 A9D54_2514 WP_067477742.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

29% id,
89% cov

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

30% id,
84% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

29% id,
84% cov

More...

BJL86_RS00565 A9D54_0115 WP_067473648.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

29% id,
85% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

27% id,
84% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

27% id,
85% cov

More...

BJL86_RS03685 A9D54_0743 WP_082908381.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

26% id,
77% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

27% id,
75% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

25% id,
43% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3426560-3430048 (frame -2) on NZ_CP015961.1 Dietzia timorensis strain ID05-A0528 chromosome, complete genome
is similar to:
PaperBLAST

Q9RW56: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Deinococcus radiodurans
Also see hits to annotated proteins above

32% id,
96% cov

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus
Also see hits to annotated proteins above

30% id,
97% cov

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri
Also see hits to annotated proteins above

26% id,
51% cov

More...

2623863-2625467 (frame -1) on NZ_CP015961.1 Dietzia timorensis strain ID05-A0528 chromosome, complete genome
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus
Also see hits to annotated proteins above

31% id,
96% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis
Also see hits to annotated proteins above

30% id,
98% cov

Q9RW56: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Deinococcus radiodurans
Also see hits to annotated proteins above

28% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory