Curated BLAST for Genomes

 

Curated BLAST

Searching in Dietzia timorensis ID05-A0528 (GCF_001659785.1)

Found 37 curated entries in PaperBLAST's database that match '3.5.99.6' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dietzia timorensis ID05-A0528, or try another query

glmS BJL86_RS04450 A9D54_0899 WP_067475181.1: glutamine--fructose-6-phosphate transaminase (isomerizing)
is similar to:
PaperBLAST

SO3506: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella oneidensis

32% id,
99% cov

Shewana3_3113: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella sp.

31% id,
99% cov

PGA1_c27890: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Phaeobacter inhibens

31% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory