Curated BLAST for Genomes

 

Curated BLAST

Searching in Erythrobacter dokdonensis DSW-74 (GCF_001677335.1)

Found 32 curated entries in PaperBLAST's database that match '3.5.1.9' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Erythrobacter dokdonensis DSW-74, or try another query

I603_RS02685 I603_0545 WP_068862244.1: alpha/beta hydrolase
is similar to:
PaperBLAST

Q9X8R1: arylformamidase (EC 3.5.1.9) from Streptomyces coelicolor

30% id,
99% cov

I603_RS04080 I603_0833 WP_068863252.1: alpha/beta hydrolase
is similar to:
PaperBLAST

M0RC77: arylformamidase (EC 3.5.1.9) from Rattus norvegicus

26% id,
96% cov

acmF / D6R242: arylformamidase (EC 3.5.1.9) from Streptomyces anulatus

32% id,
78% cov

KFA_DROME / Q9VMC9: Kynurenine formamidase; KFA; KFase; Arylformamidase; N-formylkynurenine formamidase; FKF; EC 3.5.1.9 from Drosophila melanogaster
Q9VMC9: arylformamidase (EC 3.5.1.9) from Drosophila melanogaster

28% id,
80% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory