Curated BLAST for Genomes

 

Curated BLAST

Searching in Chryseobacterium arthrosphaerae CC-VM-7 (GCF_001684965.1)

Found 41 curated entries in PaperBLAST's database that match '1.2.1.10' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Chryseobacterium arthrosphaerae CC-VM-7, or try another query

BBI00_RS10955 BBI00_10945 WP_065398804.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

B0K315: acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacter sp.

24% id,
84% cov

A0A0H3W5U9: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus
A3DCI2: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus

23% id,
35% cov

BBI00_RS02625 BBI00_02620 WP_065397309.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

A0A0H3W5K4: acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum

26% id,
47% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory