Curated BLAST for Genomes

 

Curated BLAST

Searching in Chryseobacterium arthrosphaerae CC-VM-7 (GCF_001684965.1)

Found 38 curated entries in PaperBLAST's database that match '4.4.1.5' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Chryseobacterium arthrosphaerae CC-VM-7, or try another query

mce BBI00_RS19475 BBI00_19375 WP_065400523.1: methylmalonyl-CoA epimerase
is similar to:
PaperBLAST

Q97H22: lactoylglutathione lyase (EC 4.4.1.5) from Clostridium acetobutylicum

33% id,
100% cov

BBI00_RS07595 BBI00_07585 WP_065398198.1: type 1 glutamine amidotransferase domain-containing protein
is similar to:
PaperBLAST

DJ1D_ARATH / Q9M8R4: Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC 4.4.1.5 from Arabidopsis thaliana

29% id,
47% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory