Curated BLAST for Genomes

 

Curated BLAST

Searching in Enterococcus termitis LMG 8895 (GCF_001730305.1)

Found 60 curated entries in PaperBLAST's database that match '1.1.1.85' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Enterococcus termitis LMG 8895, or try another query

leuB BCR25_RS11865 BCR25_06400 WP_069663815.1: 3-isopropylmalate dehydrogenase
is similar to:
PaperBLAST

LEU3_HEYCO / P12010: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Heyndrickxia coagulans

55% id,
97% cov

P24098: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus aquaticus

52% id,
100% cov

P61495: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus

52% id,
99% cov

More...

icd BCR25_RS01940 BCR25_01940 WP_069661914.1: NADP-dependent isocitrate dehydrogenase
is similar to:
PaperBLAST

LEU3_MYCTU / P9WKK9: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Mycobacterium tuberculosis

28% id,
99% cov

P94929: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Mycobacterium tuberculosis

28% id,
99% cov

P31958: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Clostridium pasteurianum

28% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory