Curated BLAST for Genomes

 

Curated BLAST

Searching in Enterococcus termitis LMG 8895 (GCF_001730305.1)

Found 29 curated entries in PaperBLAST's database that match '2.5.1.54' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Enterococcus termitis LMG 8895, or try another query

aroF BCR25_RS19025 BCR25_13140 WP_069665193.1: 3-deoxy-7-phosphoheptulonate synthase
is similar to:
PaperBLAST

Q9YEJ7: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Aeropyrum pernix

55% id,
96% cov

Q9WYH8: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Thermotoga maritima

52% id,
99% cov

A0A482F152: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from uncultured bacterium

54% id,
86% cov

More...

BCR25_RS18485 BCR25_12600 WP_069665089.1: 3-deoxy-7-phosphoheptulonate synthase
is similar to:
PaperBLAST

2-dehydro-3-deoxyphosphoheptonate aldolase / b1704: 3-deoxy-7-phosphoheptulonate synthase, Trp-sensitive (EC 2.5.1.54) from Escherichia coli
aroH / P00887: 3-deoxy-7-phosphoheptulonate synthase, Trp-sensitive (EC 2.5.1.54) from Escherichia coli

37% id,
87% cov

AMT16_ALTAL / C9K7C8: Phospho-2-dehydro-3-deoxyheptonate aldolase AMT16; AM-toxin biosynthesis protein 16; EC 2.5.1.54 from Alternaria alternata

32% id,
96% cov

P35170: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Corynebacterium glutamicum

33% id,
92% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory