Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetovibrio blakemorei MV-1 (GCF_001746755.1)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Magnetovibrio blakemorei MV-1, or try another query

BEN30_RS14055 BEN30_15400 WP_069958961.1: alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase
is similar to:
PaperBLAST

PGA1_c36350: Imidazolonepropionase (EC 3.5.2.7) from Phaeobacter inhibens

25% id,
79% cov

BEN30_RS07765 BEN30_09290 WP_211563330.1: alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase
is similar to:
PaperBLAST

PGA1_c36350: Imidazolonepropionase (EC 3.5.2.7) from Phaeobacter inhibens

27% id,
43% cov

ureC BEN30_RS01150 BEN30_02800 WP_069956507.1: urease subunit alpha
is similar to:
PaperBLAST

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

39% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory