Searching in Magnetovibrio blakemorei MV-1 (GCF_001746755.1)
Found 3 curated entries in PaperBLAST's database that match '2-deoxy-D-ribonate 3-dehydrogenase' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Magnetovibrio blakemorei MV-1, or try another query
| BEN30_RS04960 BEN30_06490 WP_069957260.1: SDR family oxidoreductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 30% id, 93% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 29% id, 93% cov |
| BEN30_RS04400 BEN30_05930 WP_069957132.1: SDR family NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 95% cov |
| fabG BEN30_RS04700 BEN30_06230 WP_069957183.1: 3-oxoacyl-[acyl-carrier-protein] reductase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 29% id, 96% cov |
| BEN30_RS04720 BEN30_06250 WP_069957187.1: SDR family NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 27% id, 71% cov |
| BEN30_RS03345 BEN30_04995 WP_069956919.1: SDR family NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 25% id, 63% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 78414-79232 (frame -1) on NZ_MCGG01000013.1 Magnetovibrio blakemorei strain MV-1 Q20, whole genome shotgun sequence is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 27% id, 74% cov |
| 125440-126318 (frame +1) on NZ_MCGG01000009.1 Magnetovibrio blakemorei strain MV-1 Q17, whole genome shotgun sequence is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 25% id, 66% cov |
Lawrence Berkeley National Laboratory