Curated BLAST
Searching in Streptomyces kebangsaanensis SUK12 (GCF_001906585.1)
Found 82 curated entries in PaperBLAST's database that match '1.1.1.42' as complete word(s).
These curated entries have 58 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Streptomyces kebangsaanensis SUK12, or try another query
RH94_RS19600 WP_073948837.1: NADP-dependent isocitrate dehydrogenase
is similar to: | PaperBLAST |
B2ZAA4: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Streptomyces lividans | 92% id,
100% cov |
IDH_CORGL / P50216: Isocitrate dehydrogenase [NADP]; ICD; IDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Corynebacterium glutamicum
P50216: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Corynebacterium glutamicum | 68% id,
100% cov |
IDH_AZOVI / P16100: Isocitrate dehydrogenase [NADP]; IDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Azotobacter vinelandii
icd / P16100: isocitrate dehydrogenase (NADP-dependent) (EC 1.1.1.42) from Azotobacter vinelandii | 66% id,
100% cov |
A0A0E3SSZ6: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Methanococcoides methylutens | 64% id,
99% cov |
idh / Q8L0X8: isocitrate dehydrogenase (EC 1.1.1.42) from Chlorobium limicola | 64% id,
100% cov |
IDH2_COLMA / P41561: Isocitrate dehydrogenase [NADP] 2; IDH-II; IDP-2; NADP(+)-specific ICDH 2; Oxalosuccinate decarboxylase 2; EC 1.1.1.42 from Colwellia maris | 63% id,
100% cov |
Q1XIQ9: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Colwellia psychrerythraea | 62% id,
100% cov |
IDH2_PSYS3 / A0A5A4WIZ7: Isocitrate dehydrogenase [NADP] 2; IDH 2; EC 1.1.1.42 from Psychrobacter sp. | 59% id,
100% cov |
IDH2_MYCTU / O53611: Isocitrate dehydrogenase [NADP] 2; ICD-2; IDH 2; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Mycobacterium tuberculosis
O53611: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Mycobacterium tuberculosis | 58% id,
99% cov |
V5VCI0: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Acinetobacter baumannii | 58% id,
99% cov |
More... |
RH94_RS12930 WP_073947752.1: 3-isopropylmalate dehydrogenase
is similar to: | PaperBLAST |
Q9HLV8: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermoplasma acidophilum | 29% id,
95% cov |
IDH_CALNO / P96318: Isocitrate dehydrogenase [NADP]; ICDH; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Caldococcus noboribetus
P96318: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Caldococcus noboribetus | 31% id,
89% cov |
Q9YE81: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Aeropyrum pernix | 29% id,
88% cov |
IDH_HALVD / D4GU92: Isocitrate dehydrogenase [NADP]; ICDH; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Haloferax volcanii | 30% id,
85% cov |
IDH_ARCFU / O29610: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Archaeoglobus fulgidus | 29% id,
86% cov |
icd / Q5UXA4: isocitrate dehydrogenase, NADP (EC 1.1.1.42) from Haloarcula marismortui | 29% id,
85% cov |
Q1GZD1: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Methylobacillus flagellatus | 29% id,
86% cov |
icd / RF|YP_144801.1: isocitrate dehydrogenase (NADP(+)); EC 1.1.1.42 from Thermus thermophilus
P33197: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermus thermophilus | 39% id,
63% cov |
IDH_ARCFU / O29610: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Archaeoglobus fulgidus | 41% id,
25% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory