Curated BLAST for Genomes

 

Curated BLAST

Searching in Pandoraea thiooxydans ATSB16 (GCF_001931675.1)

Found 30 curated entries in PaperBLAST's database that match '1.1.1.307' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Pandoraea thiooxydans ATSB16, or try another query

PATSB16_RS18075 PATSB16_38560 WP_047215429.1: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

65% id,
95% cov

PATSB16_RS04610 PATSB16_09690 WP_047212839.1: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

36% id,
91% cov

PATSB16_RS03325 PATSB16_06980 WP_047212629.1: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

33% id,
89% cov

A0A0S2PJI4: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

28% id,
52% cov

A0A0M4HL56: D-xylose reductase (EC 1.1.1.307) from Debaryomyces nepalensis

24% id,
52% cov

More...

PATSB16_RS05795 PATSB16_12160 WP_047213105.1: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

33% id,
87% cov

A9QVV8: D-xylose reductase (EC 1.1.1.307) from Candida tropicalis

27% id,
51% cov

P87039: D-xylose reductase (EC 1.1.1.307) from Candida tropicalis
C1K8Y9: D-xylose reductase (EC 1.1.1.307) from Candida tropicalis

27% id,
51% cov

More...

PATSB16_RS03165 PATSB16_06610 WP_047212602.1: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

31% id,
90% cov

PATSB16_RS19265 PATSB16_41010 WP_083566610.1: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

29% id,
89% cov

PATSB16_RS15990 PATSB16_34140 WP_047215063.1: aldo/keto reductase
is similar to:
PaperBLAST

S4WCW2: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

25% id,
93% cov

A0A0M4HL56: D-xylose reductase (EC 1.1.1.307) from Debaryomyces nepalensis

30% id,
62% cov

XYL1_CANTE / O74237: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Candida tenuis
O74237: D-xylose reductase (EC 1.1.1.307) from Yamadazyma tenuis

34% id,
35% cov

More...

PATSB16_RS07290 PATSB16_15450 WP_047213458.1: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

31% id,
61% cov

PATSB16_RS06610 PATSB16_13970 WP_047213295.1: aldo/keto reductase family oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

30% id,
52% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1590969-1591865 (frame -1) on NZ_CP014839.1 Pandoraea thiooxydans strain ATSB16 chromosome, complete genome
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis
Also see hits to annotated proteins above

31% id,
65% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory