Searching in Pandoraea thiooxydans ATSB16 (GCF_001931675.1)
Found 5 curated entries in PaperBLAST's database that match '4.1.2.20' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pandoraea thiooxydans ATSB16, or try another query
| hpaI PATSB16_RS08695 PATSB16_18430 WP_047213791.1: 4-hydroxy-2-oxoheptanedioate aldolase is similar to: | PaperBLAST |
GARL_ECOLI / P23522: 5-keto-4-deoxy-D-glucarate aldolase; KDGluc aldolase; KDGlucA; 2-dehydro-3-deoxy-D-glucarate aldolase; 2-keto-3-deoxy-D-glucarate aldolase; 5-dehydro-4-deoxy-D-glucarate aldolase; Alpha-keto-beta-deoxy-D-glucarate aldolase; EC 4.1.2.20 from Escherichia coli | 50% id, 98% cov |
GARL_ECO7I / B7NJZ1: 5-keto-4-deoxy-D-glucarate aldolase; KDGluc aldolase; KDGlucA; 2-dehydro-3-deoxy-D-glucarate aldolase; 2-keto-3-deoxy-D-glucarate aldolase; 5-dehydro-4-deoxy-D-glucarate aldolase; Alpha-keto-beta-deoxy-D-glucarate aldolase; EC 4.1.2.20 from Escherichia coli | 50% id, 98% cov |
| dapA PATSB16_RS05105 PATSB16_10710 WP_047212941.1: 4-hydroxy-tetrahydrodipicolinate synthase is similar to: | PaperBLAST |
P75682: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) from Escherichia coli | 32% id, 99% cov |
| PATSB16_RS03670 PATSB16_07690 WP_047212687.1: dihydrodipicolinate synthase family protein is similar to: | PaperBLAST |
P75682: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) from Escherichia coli | 31% id, 98% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory