Searching in Pandoraea thiooxydans ATSB16 (GCF_001931675.1)
Found 12 curated entries in PaperBLAST's database that match '4.3.1.1' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pandoraea thiooxydans ATSB16, or try another query
| fumC PATSB16_RS19025 PATSB16_40520 WP_072628568.1: class II fumarate hydratase is similar to: | PaperBLAST |
ASPA_PSEFL / P07346: Aspartate ammonia-lyase; Aspartase; EC 4.3.1.1 from Pseudomonas fluorescens | 42% id, 97% cov |
ASPA_PSECO / P0DXC8: Aspartate ammonia-lyase; Aspartase; EC 4.3.1.1 from Pseudomonas canavaninivorans | 41% id, 98% cov |
Q0PC50: aspartate ammonia-lyase (EC 4.3.1.1) from Campylobacter jejuni | 41% id, 99% cov |
| PATSB16_RS03440 PATSB16_07230 WP_047212649.1: adenylosuccinate lyase family protein is similar to: | PaperBLAST |
ASPA_BACSP / Q9LCC6: Aspartate ammonia-lyase; Aspartase; EC 4.3.1.1 from Bacillus sp. | 20% id, 89% cov |
ASPA_BACSU / P26899: Aspartate ammonia-lyase; Aspartase; EC 4.3.1.1 from Bacillus subtilis | 22% id, 80% cov |
Q0PC50: aspartate ammonia-lyase (EC 4.3.1.1) from Campylobacter jejuni | 23% id, 63% cov |
| purB PATSB16_RS00440 PATSB16_00860 WP_047216812.1: adenylosuccinate lyase is similar to: | PaperBLAST |
ASPA_PSECO / P0DXC8: Aspartate ammonia-lyase; Aspartase; EC 4.3.1.1 from Pseudomonas canavaninivorans | 25% id, 57% cov |
ASPA_PSEFL / P07346: Aspartate ammonia-lyase; Aspartase; EC 4.3.1.1 from Pseudomonas fluorescens | 25% id, 56% cov |
ASPA_PSEAE / Q9HTD7: Aspartate ammonia-lyase; Aspartase; PA-AspA; EC 4.3.1.1 from Pseudomonas aeruginosa | 25% id, 55% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory