Curated BLAST for Genomes

 

Curated BLAST

Searching in Carboxydothermus pertinax Ug1 (GCF_001950255.1)

Found 21 curated entries in PaperBLAST's database that match '6.3.4.5' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Carboxydothermus pertinax Ug1, or try another query

cpu_RS12215 cpu_23780 WP_305764301.1: argininosuccinate synthase
is similar to:
PaperBLAST

H9BG20: argininosuccinate synthase (EC 6.3.4.5) from Leishmania donovani

67% id,
95% cov

A4I066: argininosuccinate synthase (EC 6.3.4.5) from Leishmania infantum

67% id,
95% cov

ASSY_THET8 / P59846: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermus thermophilus

65% id,
99% cov

More...

mnmA cpu_RS01170 cpu_02230 WP_088775878.1: tRNA 2-thiouridine(34) synthase MnmA
is similar to:
PaperBLAST

Q2Z0F6: argininosuccinate synthase (EC 6.3.4.5) from Agaricus bisporus

26% id,
28% cov

ASSY_YEAST / P22768: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Saccharomyces cerevisiae

36% id,
15% cov

ARG1: argininosuccinate synthase; EC 6.3.4.5 from Candida albicans

34% id,
14% cov

larE cpu_RS03015 cpu_05900 WP_075858521.1: ATP-dependent sacrificial sulfur transferase LarE
is similar to:
PaperBLAST

BT3760: arginosuccinate synthetase (EC 6.3.4.5) from Bacteroides thetaiotaomicron

32% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory