Curated BLAST for Genomes

 

Curated BLAST

Searching in Natronorubrum daqingense JX313 (GCF_001971705.1)

Found 13 curated entries in PaperBLAST's database that match '4.2.1.18' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Natronorubrum daqingense JX313, or try another query

BB347_RS14695 BB347_14695 WP_076582783.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

38% id,
98% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

37% id,
92% cov

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

33% id,
98% cov

More...

BB347_RS09135 BB347_09135 WP_076580767.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

39% id,
94% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

37% id,
95% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

37% id,
83% cov

More...

BB347_RS07165 BB347_07165 WP_076582306.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

38% id,
97% cov

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

36% id,
96% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

36% id,
83% cov

More...

BB347_RS01645 BB347_01645 WP_076579030.1: 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

36% id,
99% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

34% id,
93% cov

AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus

32% id,
92% cov

More...

BB347_RS11510 BB347_11510 WP_076581564.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

36% id,
94% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

36% id,
95% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

36% id,
83% cov

More...

BB347_RS14455 BB347_14455 WP_076582854.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

35% id,
93% cov

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

32% id,
88% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

29% id,
92% cov

More...

BB347_RS11740 BB347_11740 WP_076581632.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

36% id,
88% cov

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

32% id,
86% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

35% id,
75% cov

More...

BB347_RS11400 BB347_11400 WP_076581536.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

32% id,
92% cov

AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus

36% id,
82% cov

AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens
AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens
Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens

36% id,
76% cov

More...

BB347_RS04120 BB347_04120 WP_076578132.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

30% id,
98% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

30% id,
99% cov

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

30% id,
93% cov

More...

BB347_RS04290 BB347_04290 WP_076578060.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

30% id,
93% cov

SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti

26% id,
94% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

29% id,
82% cov

More...

BB347_RS04895 BB347_04895 WP_076577835.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

30% id,
85% cov

BB347_RS14525 BB347_14525 WP_076582834.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

27% id,
91% cov

BB347_RS11430 BB347_11430 WP_076581543.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

25% id,
93% cov

SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti

25% id,
95% cov

Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens

24% id,
96% cov

More...

BB347_RS04750 BB347_04750 WP_076577889.1: 1,4-dihydroxy-2-naphthoyl-CoA synthase
is similar to:
PaperBLAST

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

26% id,
70% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory