Curated BLAST for Genomes

 

Curated BLAST

Searching in Thioalkalivibrio halophilus HL17 (GCF_001995255.1)

Found 14 curated entries in PaperBLAST's database that match '1.2.1.41' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thioalkalivibrio halophilus HL17, or try another query

B1A74_RS11315 B1A74_11305 WP_018946610.1: glutamate-5-semialdehyde dehydrogenase
is similar to:
PaperBLAST

PROA_ECOLI / P07004: Gamma-glutamyl phosphate reductase; GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase; EC 1.2.1.41 from Escherichia coli
ProA / b0243: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Escherichia coli
proA / P07004: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Escherichia coli

48% id,
100% cov

A7Y114: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Halobacillus halophilus

45% id,
98% cov

Echvi_2633: gamma-glutamylphosphate reductase (EC 1.2.1.41) from Echinicola vietnamensis

38% id,
98% cov

More...

proB B1A74_RS09055 B1A74_09050 WP_018947182.1: glutamate 5-kinase
is similar to:
PaperBLAST

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

33% id,
52% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa
Q941T1: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Oryza sativa

34% id,
39% cov

P5CS_MOUSE / Q9Z110: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Mus musculus
Q9Z110: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Mus musculus

37% id,
36% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory