Curated BLAST for Genomes

 

Curated BLAST

Searching in Thioalkalivibrio halophilus HL17 (GCF_001995255.1)

Found 9 curated entries in PaperBLAST's database that match 'anthranilate synthase component 1' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thioalkalivibrio halophilus HL17, or try another query

trpE B1A74_RS11915 B1A74_11905 WP_018947535.1: anthranilate synthase component I
is similar to:
PaperBLAST

TRPE_PSEPU / P20579: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas putida

61% id,
99% cov

TRPE_PSEAE / P20580: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas aeruginosa

60% id,
99% cov

TRPE_YEAST / P00899: Anthranilate synthase component 1; Anthranilate synthase component I; EC 4.1.3.27 from Saccharomyces cerevisiae

38% id,
93% cov

More...

B1A74_RS03675 B1A74_03680 WP_077243791.1: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

TRPE_PSEAE / P20580: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas aeruginosa

37% id,
90% cov

TRPE_SACS2 / Q06128: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Saccharolobus solfataricus

38% id,
83% cov

TRPE_PSEPU / P20579: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas putida

41% id,
76% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory