Curated BLAST for Genomes

 

Curated BLAST

Searching in Thioalkalivibrio halophilus HL17 (GCF_001995255.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Thioalkalivibrio halophilus HL17, or try another query

B1A74_RS11910 B1A74_11900 WP_077244752.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

62% id,
96% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

62% id,
95% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

47% id,
99% cov

guaA B1A74_RS04130 B1A74_04135 WP_077243864.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

29% id,
99% cov

carA B1A74_RS02465 B1A74_02470 WP_077243672.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

31% id,
92% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

29% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory