Curated BLAST for Genomes

 

Curated BLAST

Searching in Vagococcus penaei CD276T (GCF_001998885.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Vagococcus penaei CD276T, or try another query

rbsK BW732_RS03325 BW732_03355 WP_077275456.1: ribokinase
is similar to:
PaperBLAST

RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus
A0A0H2WZY4: ribokinase (EC 2.7.1.15) from Staphylococcus aureus

49% id,
98% cov

RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli
RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli
rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli

47% id,
95% cov

A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae

45% id,
96% cov

More...

BW732_RS07505 BW732_07580 WP_161485536.1: phosphotransferase family protein
is similar to:
PaperBLAST

CCRZ_BACSU / C0SPC1: Cell cycle regulator CcrZ; Cell cycle regulator protein interacting with FtsZ; EC 2.7.1.15; EC 2.7.1.229 from Bacillus subtilis

40% id,
82% cov

CCRZ_STRP2 / A0A0H2ZQL5: Cell cycle regulator CcrZ; Cell cycle regulator protein interacting with FtsZ; EC 2.7.1.15; EC 2.7.1.229 from Streptococcus pneumoniae
CCRZ_STRR6 / Q8DQV8: Cell cycle regulator CcrZ; Cell cycle regulator protein interacting with FtsZ; EC 2.7.1.15; EC 2.7.1.229 from Streptococcus pneumoniae

35% id,
93% cov

iolC BW732_RS08440 BW732_08510 WP_077276338.1: 5-dehydro-2-deoxygluconokinase
is similar to:
PaperBLAST

RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli
RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli
rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli

26% id,
98% cov

BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

27% id,
91% cov

BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis

25% id,
98% cov

More...

BW732_RS03535 BW732_03570 WP_077275495.1: hexose kinase
is similar to:
PaperBLAST

Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

25% id,
92% cov

Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum

24% id,
83% cov

SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti

19% id,
92% cov

More...

pfkB BW732_RS07460 BW732_07535 WP_077276158.1: 1-phosphofructokinase
is similar to:
PaperBLAST

AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

24% id,
86% cov

Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum

25% id,
79% cov

RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus
A0A0H2WZY4: ribokinase (EC 2.7.1.15) from Staphylococcus aureus

20% id,
96% cov

More...

rpiA BW732_RS06100 BW732_06175 WP_077275943.1: ribose-5-phosphate isomerase RpiA
is similar to:
PaperBLAST

RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis

41% id,
41% cov

BW732_RS08720 BW732_08795 WP_077276385.1: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
is similar to:
PaperBLAST

RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana
RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana
A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana

26% id,
63% cov

BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis

26% id,
54% cov

RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis

24% id,
40% cov

thiD BW732_RS00100 BW732_00100 WP_077274877.1: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
is similar to:
PaperBLAST

RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana
RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana
A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana

30% id,
39% cov

glmM BW732_RS02275 BW732_02295 WP_077275270.1: phosphoglucosamine mutase
is similar to:
PaperBLAST

RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis

28% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1575782-1576600 (frame +2) on NZ_CP019609.1 Vagococcus penaei strain CD276T chromosome, complete genome
is similar to:
PaperBLAST

CCRZ_BACSU / C0SPC1: Cell cycle regulator CcrZ; Cell cycle regulator protein interacting with FtsZ; EC 2.7.1.15; EC 2.7.1.229 from Bacillus subtilis
Also see hits to annotated proteins above

39% id,
85% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory