Curated BLAST for Genomes

 

Curated BLAST

Searching in Thioalkalivibrio denitrificans ALJD (GCF_002000365.1)

Found 116 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 92 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thioalkalivibrio denitrificans ALJD, or try another query

fba B1C78_RS01585 B1C78_01605 WP_077277388.1: fructose-bisphosphate aldolase class II
is similar to:
PaperBLAST

A0Q7I9: fructose-bisphosphate aldolase (EC 4.1.2.13) from Francisella tularensis

76% id,
100% cov

Q602L6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Methylococcus capsulatus

74% id,
100% cov

ALF_XANFL / Q56815: Fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Xanthobacter flavus

71% id,
100% cov

More...

B1C78_RS10480 B1C78_10540 WP_077279112.1: fructose-bisphosphate aldolase class I
is similar to:
PaperBLAST

Q8L207: fructose-bisphosphate aldolase (EC 4.1.2.13) from Bartonella henselae

59% id,
99% cov

ALFC1_ORYSJ / P17784: Fructose-bisphosphate aldolase 1, cytoplasmic; Cytoplasmic aldolase; cALD; Gravity-specific protein GSC 233; EC 4.1.2.13 from Oryza sativa

55% id,
94% cov

ALFC8_ARATH / Q9LF98: Fructose-bisphosphate aldolase 8, cytosolic; AtFBA8; Cytosolic aldolase 1; cAld1; EC 4.1.2.13 from Arabidopsis thaliana

55% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory