Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Thioalkalivibrio denitrificans ALJD (GCF_002000365.1)

Found 16 curated entries in PaperBLAST's database that match '4.2.1.9' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thioalkalivibrio denitrificans ALJD, or try another query

ilvD B1C78_RS13830 B1C78_13895 WP_077279761.1: dihydroxy-acid dehydratase is similar to:	PaperBLAST
ILVD_CAUVC / P55186: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Caulobacter vibrioides	77% id, 100% cov
ILVD_RHIJ3 / Q1MIB2: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Rhizobium johnstonii	76% id, 100% cov
ILVD_ECOLI / P05791: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Escherichia coli IlvD / b3771: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli ilvD / P05791: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli	74% id, 100% cov
Q8NQZ9: dihydroxy-acid dehydratase (EC 4.2.1.9) from Corynebacterium glutamicum	65% id, 100% cov
ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis	39% id, 96% cov
ILVD_ARATH / Q9LIR4: Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana Q9LIR4: dihydroxy-acid dehydratase (EC 4.2.1.9) from Arabidopsis thaliana	37% id, 91% cov
ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus	40% id, 79% cov
Q97UB2: dihydroxy-acid dehydratase (EC 4.2.1.9) from Saccharolobus solfataricus	41% id, 64% cov
ilvD / Q0K7F8: dihydroxyacid dehydratase (EC 4.2.1.9) from Cupriavidus necator Q0K7F8: dihydroxy-acid dehydratase (EC 4.2.1.9) from Cupriavidus necator	36% id, 64% cov
ILV3_YEAST / P39522: Dihydroxy-acid dehydratase, mitochondrial; DAD; EC 4.2.1.9 from Saccharomyces cerevisiae	37% id, 60% cov
ILVC_ASPFU / Q4X099: Dihydroxy-acid dehydratase ilvC, mitochondrial; DHAD ilvC; EC 4.2.1.9 from Aspergillus fumigatus	36% id, 58% cov
A0A481UJA7: dihydroxy-acid dehydratase (EC 4.2.1.9) from Hevea brasiliensis	34% id, 59% cov
ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus	41% id, 44% cov
ilvD / Q0K7F8: dihydroxyacid dehydratase (EC 4.2.1.9) from Cupriavidus necator Q0K7F8: dihydroxy-acid dehydratase (EC 4.2.1.9) from Cupriavidus necator	48% id, 36% cov
ILVD_ARATH / Q9LIR4: Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana Q9LIR4: dihydroxy-acid dehydratase (EC 4.2.1.9) from Arabidopsis thaliana	40% id, 40% cov
ILV3_YEAST / P39522: Dihydroxy-acid dehydratase, mitochondrial; DAD; EC 4.2.1.9 from Saccharomyces cerevisiae	46% id, 33% cov
A0A481UJA7: dihydroxy-acid dehydratase (EC 4.2.1.9) from Hevea brasiliensis	46% id, 32% cov
ILVC_ASPFU / Q4X099: Dihydroxy-acid dehydratase ilvC, mitochondrial; DHAD ilvC; EC 4.2.1.9 from Aspergillus fumigatus	45% id, 33% cov
Q97UB2: dihydroxy-acid dehydratase (EC 4.2.1.9) from Saccharolobus solfataricus	41% id, 34% cov
More...

ilvD B1C78_RS10490 B1C78_10550 WP_077279114.1: dihydroxy-acid dehydratase is similar to:	PaperBLAST
ilvD / Q0K7F8: dihydroxyacid dehydratase (EC 4.2.1.9) from Cupriavidus necator Q0K7F8: dihydroxy-acid dehydratase (EC 4.2.1.9) from Cupriavidus necator	65% id, 100% cov
ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis	55% id, 96% cov
A0A481UJA7: dihydroxy-acid dehydratase (EC 4.2.1.9) from Hevea brasiliensis	51% id, 90% cov
ILV3_YEAST / P39522: Dihydroxy-acid dehydratase, mitochondrial; DAD; EC 4.2.1.9 from Saccharomyces cerevisiae	48% id, 96% cov
ILVD_ARATH / Q9LIR4: Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana Q9LIR4: dihydroxy-acid dehydratase (EC 4.2.1.9) from Arabidopsis thaliana	50% id, 91% cov
ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus	46% id, 99% cov
ILVC_ASPFU / Q4X099: Dihydroxy-acid dehydratase ilvC, mitochondrial; DHAD ilvC; EC 4.2.1.9 from Aspergillus fumigatus	48% id, 94% cov
Q97UB2: dihydroxy-acid dehydratase (EC 4.2.1.9) from Saccharolobus solfataricus	45% id, 99% cov
ILVD_RHIJ3 / Q1MIB2: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Rhizobium johnstonii	40% id, 99% cov
ILVD_CAUVC / P55186: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Caulobacter vibrioides	40% id, 98% cov
ILVD_ECOLI / P05791: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Escherichia coli IlvD / b3771: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli ilvD / P05791: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli	38% id, 98% cov
Q8NQZ9: dihydroxy-acid dehydratase (EC 4.2.1.9) from Corynebacterium glutamicum	38% id, 99% cov
ILVD_ECOLI / P05791: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Escherichia coli IlvD / b3771: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli ilvD / P05791: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli	50% id, 33% cov
Q8NQZ9: dihydroxy-acid dehydratase (EC 4.2.1.9) from Corynebacterium glutamicum	47% id, 34% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory