Curated BLAST for Genomes

 

Curated BLAST

Searching in Thioalkalivibrio denitrificans ALJD (GCF_002000365.1)

Found 1 curated entries in PaperBLAST's database that match 'small subunit of acetolactate synthase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Thioalkalivibrio denitrificans ALJD, or try another query

ilvN B1C78_RS09745 B1C78_09805 WP_077278972.1: acetolactate synthase small subunit
is similar to:
PaperBLAST

AN4430: small subunit of acetolactate synthase from Emericella nidulans

44% id,
28% cov

AN4430: small subunit of acetolactate synthase from Emericella nidulans

26% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory