Searching in Flavobacterium sp. LM5 (GCF_002017945.1)
Found 3 curated entries in PaperBLAST's database that match '2.6.1.113' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Flavobacterium sp. LM5, or try another query
| bioA BXU11_RS00825 BXU11_00830 WP_078210658.1: adenosylmethionine--8-amino-7-oxononanoate transaminase is similar to: | PaperBLAST |
SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa | 28% id, 95% cov |
| rocD BXU11_RS08775 BXU11_08795 WP_078212259.1: ornithine--oxo-acid transaminase is similar to: | PaperBLAST |
SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa | 29% id, 90% cov |
| BXU11_RS14330 BXU11_14290 WP_078213037.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme is similar to: | PaperBLAST |
SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa | 25% id, 51% cov |
| BXU11_RS07400 BXU11_07410 WP_078211625.1: aspartate aminotransferase family protein is similar to: | PaperBLAST |
SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa | 28% id, 29% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 196507-197814 (frame -1) on NZ_MUFX01000001.1 Flavobacterium sp. LM5 Flavobacterium_sp_LM5_contig1, whole genome shotgun sequence is similar to: | PaperBLAST |
SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa | 28% id, 96% cov |
Lawrence Berkeley National Laboratory