Curated BLAST for Genomes

 

Curated BLAST

Searching in Flavobacterium sp. LM5 (GCF_002017945.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Flavobacterium sp. LM5, or try another query

BXU11_RS02105 BXU11_02115 WP_024980617.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

26% id,
98% cov

BXU11_RS00305 BXU11_00305 WP_078210593.1: 1-phosphofructokinase family hexose kinase
is similar to:
PaperBLAST

A0A0H3AER7: fructokinase (EC 2.7.1.4) from Vibrio cholerae

27% id,
82% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

25% id,
86% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

25% id,
86% cov

More...

BXU11_RS02860 BXU11_02870 WP_078212034.1: sugar kinase
is similar to:
PaperBLAST

Echvi_2804: Fructokinase (EC 2.7.1.4) from Echinicola vietnamensis

22% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory