Curated BLAST for Genomes

 

Curated BLAST

Searching in Flavobacterium sp. LM5 (GCF_002017945.1)

Found 1 curated entries in PaperBLAST's database that match '4.1.2.18' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Flavobacterium sp. LM5, or try another query

BXU11_RS01135 BXU11_01140 WP_024982501.1: dihydrodipicolinate synthase family protein
is similar to:
PaperBLAST

kdgA / O54288: KDG-aldolase subunit (EC 4.1.2.28; EC 4.1.2.18; EC 4.1.2.51) from Saccharolobus solfataricus

26% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory