Curated BLAST for Genomes

 

Curated BLAST

Searching in Flavobacterium sp. LM5 (GCF_002017945.1)

Found 23 curated entries in PaperBLAST's database that match '4.3.1.3' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Flavobacterium sp. LM5, or try another query

hutH BXU11_RS15100 BXU11_15065 WP_078213149.1: histidine ammonia-lyase
is similar to:
PaperBLAST

Sama_1631: Histidine ammonia-lyase (EC 4.3.1.3) from Shewanella amazonensis

49% id,
97% cov

Ga0059261_3963: Histidine ammonia-lyase (EC 4.3.1.3) from Sphingomonas koreensis

45% id,
94% cov

CA265_RS22270: Histidine ammonia-lyase (EC 4.3.1.3) from Pedobacter sp.

43% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory