Curated BLAST for Genomes

 

Curated BLAST

Searching in Alkalihalobacterium alkalinitrilicum DSM 22532 (GCF_002019605.1)

Found 31 curated entries in PaperBLAST's database that match '1.1.1.28' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Alkalihalobacterium alkalinitrilicum DSM 22532, or try another query

BK574_RS17260 WP_078429444.1: FAD-linked oxidase C-terminal domain-containing protein
is similar to:		 PaperBLAST

A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus

 44% id,
94% cov

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

 32% id,
99% cov

G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae

 38% id,
75% cov

BK574_RS21465 WP_078430036.1: D-glycerate dehydrogenase
is similar to:		 PaperBLAST

2KGR_VITVI / A5CAL1: Glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR; 2-keto-L-gulonate reductase; Vv2KGR; EC 1.1.1.26; EC 1.1.1.28; EC 1.1.1.79; EC 1.1.1.- from Vitis vinifera

 46% id,
81% cov

A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus

 33% id,
99% cov

Q1GAA2: D-lactate dehydrogenase (EC 1.1.1.28); D-2-hydroxyacid dehydrogenase (NAD+) (EC 1.1.1.345) from Lactobacillus delbrueckii

 32% id,
92% cov

More...

glcD BK574_RS12965 WP_078428877.1: glycolate oxidase subunit GlcD
is similar to:		 PaperBLAST

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

 34% id,
100% cov

A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus

 34% id,
95% cov

G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae

 33% id,
75% cov

BK574_RS21120 WP_142248010.1: D-glycerate dehydrogenase
is similar to:		 PaperBLAST

2KGR_VITVI / A5CAL1: Glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR; 2-keto-L-gulonate reductase; Vv2KGR; EC 1.1.1.26; EC 1.1.1.28; EC 1.1.1.79; EC 1.1.1.- from Vitis vinifera

 34% id,
98% cov

A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus

 30% id,
92% cov

Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa

 32% id,
84% cov

More...

serA BK574_RS10245 WP_078430830.1: phosphoglycerate dehydrogenase
is similar to:		 PaperBLAST

O66939: D-lactate dehydrogenase (EC 1.1.1.28) from Aquifex aeolicus

 37% id,
87% cov

2KGR_VITVI / A5CAL1: Glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR; 2-keto-L-gulonate reductase; Vv2KGR; EC 1.1.1.26; EC 1.1.1.28; EC 1.1.1.79; EC 1.1.1.- from Vitis vinifera

 32% id,
88% cov

E0NDE9: D-lactate dehydrogenase (EC 1.1.1.28) from Pediococcus acidilactici

 33% id,
86% cov

More...

BK574_RS02550 WP_078427362.1: C-terminal binding protein
is similar to:		 PaperBLAST

HtpH / b1380: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli
ldhA: D-lactate dehydrogenase; EC 1.1.1.28 from Escherichia coli
ldhA / P52643: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli

 31% id,
97% cov

A0A140N893: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli

 31% id,
97% cov

vanH / Q7B609: D-lactate dehydrogenase (EC 1.1.1.28) from Enterococcus faecium

 35% id,
81% cov

More...

BK574_RS02530 WP_078427359.1: phosphoglycerate dehydrogenase
is similar to:		 PaperBLAST

F8A9V0: D-lactate dehydrogenase (EC 1.1.1.28) from Thermodesulfatator indicus

 29% id,
83% cov

LDHD_PEDAC / Q59642: D-lactate/D-glycerate dehydrogenase; D-LDH/GDH; D-specific 2-hydroxyacid dehydrogenase; EC 1.1.1.28; EC 1.1.1.29 from Pediococcus acidilactici
ldhD / GI|897794: D-lactate dehydrogenase; EC 1.1.1.28; EC 1.1.1.81 from Pediococcus acidilactici

 25% id,
94% cov

ldhD / Q88VJ2: D-lactate dehydrogenase subunit (EC 1.1.1.28) from Lactiplantibacillus plantarum
C0LJH4: D-lactate dehydrogenase (EC 1.1.1.28) from Lactiplantibacillus plantarum

 26% id,
90% cov

More...

BK574_RS06735 WP_078428033.1: D-2-hydroxyacid dehydrogenase
is similar to:		 PaperBLAST

LDHD_LACDA / P26297: D-lactate dehydrogenase; D-LDH; D-specific 2-hydroxyacid dehydrogenase; EC 1.1.1.28 from Lactobacillus delbrueckii
ldhA / OMNI|NTL01LD0096: D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus delbrueckii

 24% id,
86% cov

2KGR_VITVI / A5CAL1: Glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR; 2-keto-L-gulonate reductase; Vv2KGR; EC 1.1.1.26; EC 1.1.1.28; EC 1.1.1.79; EC 1.1.1.- from Vitis vinifera

 26% id,
79% cov

dpaA BK574_RS26645 WP_075385698.1: dipicolinic acid synthetase subunit A
is similar to:		 PaperBLAST

A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus

 27% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory