Curated BLAST for Genomes

 

Curated BLAST

Searching in Alkalihalobacterium alkalinitrilicum DSM 22532 (GCF_002019605.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.3' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Alkalihalobacterium alkalinitrilicum DSM 22532, or try another query

BK574_RS21130 WP_075388021.1: homoserine dehydrogenase
is similar to:		 PaperBLAST

D8WXQ1: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus

 69% id,
99% cov

DHOM_BACSU / P19582: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Bacillus subtilis
P19582: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus subtilis

 67% id,
99% cov

Q56R01: homoserine dehydrogenase (EC 1.1.1.3) from Streptomyces clavuligerus

 41% id,
98% cov

More...

BK574_RS13245 WP_078428931.1: homoserine dehydrogenase
is similar to:		 PaperBLAST

F9VNG5: homoserine dehydrogenase (EC 1.1.1.3) from Sulfurisphaera tokodaii

 35% id,
100% cov

Q5SL04: homoserine dehydrogenase (EC 1.1.1.3) from Thermus thermophilus

 36% id,
91% cov

O58802: homoserine dehydrogenase (EC 1.1.1.3) from Pyrococcus horikoshii

 30% id,
96% cov

More...

BK574_RS13545 WP_158211654.1: homoserine dehydrogenase
is similar to:		 PaperBLAST

DHOM_LACLC / P52985: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Lactococcus lactis

 35% id,
99% cov

D8WXQ2: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus

 35% id,
95% cov

Q5SL04: homoserine dehydrogenase (EC 1.1.1.3) from Thermus thermophilus

 37% id,
90% cov

More...

BK574_RS22615 WP_078430173.1: aspartate kinase
is similar to:		 PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

 42% id,
54% cov

BT2403: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Bacteroides thetaiotaomicron

 29% id,
48% cov

ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
thrA / P00561: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
P00561: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Escherichia coli

 31% id,
43% cov

More...

BK574_RS11150 WP_078428661.1: aspartate kinase
is similar to:		 PaperBLAST

ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
thrA / P00561: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
P00561: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Escherichia coli

 31% id,
57% cov

CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp.

 30% id,
56% cov

Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis

 29% id,
56% cov

More...

dapG BK574_RS26660 WP_078430740.1: aspartate kinase
is similar to:		 PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

 32% id,
54% cov

BT2403: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Bacteroides thetaiotaomicron

 29% id,
50% cov

Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis

 32% id,
43% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory