Searching in Alkalihalobacterium alkalinitrilicum DSM 22532 (GCF_002019605.1)
Found 13 curated entries in PaperBLAST's database that match '1.1.2.4' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Alkalihalobacterium alkalinitrilicum DSM 22532, or try another query
| BK574_RS17260 WP_078429444.1: FAD-linked oxidase C-terminal domain-containing protein is similar to: | PaperBLAST |
LDHD_DANRE / F1QXM5: Probable D-lactate dehydrogenase, mitochondrial; DLD; Lactate dehydrogenase D; EC 1.1.2.4 from Danio rerio | 47% id, 91% cov |
LDHD_MOUSE / Q7TNG8: Probable D-lactate dehydrogenase, mitochondrial; DLD; Lactate dehydrogenase D; EC 1.1.2.4 from Mus musculus | 45% id, 94% cov |
DLD_ARATH / Q94AX4: D-lactate dehydrogenase [cytochrome], mitochondrial; AtD-LDH; D-lactate ferricytochrome C oxidoreductase; Glycolate dehydrogenase; EC 1.1.2.4 from Arabidopsis thaliana | 42% id, 80% cov |
| glcD BK574_RS12965 WP_078428877.1: glycolate oxidase subunit GlcD is similar to: | PaperBLAST |
LDHD_MOUSE / Q7TNG8: Probable D-lactate dehydrogenase, mitochondrial; DLD; Lactate dehydrogenase D; EC 1.1.2.4 from Mus musculus | 34% id, 95% cov |
LDHD_DANRE / F1QXM5: Probable D-lactate dehydrogenase, mitochondrial; DLD; Lactate dehydrogenase D; EC 1.1.2.4 from Danio rerio | 32% id, 84% cov |
W1QLN6: D-lactate dehydrogenase (cytochrome) (EC 1.1.2.4) from Ogataea angusta | 33% id, 82% cov |
| BK574_RS19360 WP_158211696.1: YwmB family TATA-box binding protein is similar to: | PaperBLAST |
DLD3_YEAST / P39976: D-2-hydroxyglutarate--pyruvate transhydrogenase DLD3; D-2HG--pyruvate transhydrogenase DLD3; (R)-2-hydroxyglutarate--pyruvate transhydrogenase; D-lactate dehydrogenase [cytochrome] 3; D-lactate ferricytochrome C oxidoreductase; D-LCR; EC 1.1.99.40; EC 1.1.2.4 from Saccharomyces cerevisiae | 33% id, 10% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3568944-3570329 (frame -3) on NZ_KV917368.1 Alkalihalobacterium alkalinitrilicum strain DSM 22532 Scaffold1, whole genome shotgun sequence is similar to: | PaperBLAST |
LDHD_DANRE / F1QXM5: Probable D-lactate dehydrogenase, mitochondrial; DLD; Lactate dehydrogenase D; EC 1.1.2.4 from Danio rerio | 46% id, 93% cov |
LDHD_HUMAN / Q86WU2: Probable D-lactate dehydrogenase, mitochondrial; DLD; Lactate dehydrogenase D; EC 1.1.2.4 from Homo sapiens | 46% id, 38% cov |
| 2696779-2698260 (frame -2) on NZ_KV917368.1 Alkalihalobacterium alkalinitrilicum strain DSM 22532 Scaffold1, whole genome shotgun sequence is similar to: | PaperBLAST |
LDHD_MOUSE / Q7TNG8: Probable D-lactate dehydrogenase, mitochondrial; DLD; Lactate dehydrogenase D; EC 1.1.2.4 from Mus musculus | 34% id, 96% cov |
Lawrence Berkeley National Laboratory