Curated BLAST for Genomes

 

Curated BLAST

Searching in Alkalihalobacterium alkalinitrilicum DSM 22532 (GCF_002019605.1)

Found 33 curated entries in PaperBLAST's database that match '1.5.1.2' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Alkalihalobacterium alkalinitrilicum DSM 22532, or try another query

proC BK574_RS11120 WP_078428656.1: pyrroline-5-carboxylate reductase
is similar to:		 PaperBLAST

P5CR2_BACSU / P54552: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; PCA reductase 2; EC 1.5.1.2 from Bacillus subtilis

 43% id,
96% cov

P5CR_METAC / Q9HH99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Methanosarcina acetivorans

 37% id,
100% cov

F4K884: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Arabidopsis thaliana

 37% id,
94% cov

More...

comER BK574_RS12875 WP_075386828.1: late competence protein ComER
is similar to:		 PaperBLAST

P5CR3_BACSU / Q00777: Pyrroline-5-carboxylate reductase 3; P5C reductase 3; P5CR 3; PCA reductase 3; EC 1.5.1.2 from Bacillus subtilis

 30% id,
99% cov

P5CR1_MOUSE / Q922W5: Pyrroline-5-carboxylate reductase 1, mitochondrial; P5C reductase 1; P5CR 1; EC 1.5.1.2 from Mus musculus

 21% id,
80% cov

P5CR2_HUMAN / Q96C36: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; EC 1.5.1.2 from Homo sapiens
Q96C36: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Homo sapiens

 22% id,
77% cov

BK574_RS20725 WP_078429929.1: ketopantoate reductase family protein
is similar to:		 PaperBLAST

F4K884: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Arabidopsis thaliana

 27% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory