Curated BLAST for Genomes

 

Curated BLAST

Searching in Alkalihalobacterium alkalinitrilicum DSM 22532 (GCF_002019605.1)

Found 11 curated entries in PaperBLAST's database that match '5.1.99.1' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Alkalihalobacterium alkalinitrilicum DSM 22532, or try another query

mce BK574_RS11400 WP_075385005.1: methylmalonyl-CoA epimerase
is similar to:
PaperBLAST

MCE_PYRHO / O58010: Methylmalonyl-CoA epimerase; DL-methylmalonyl-CoA racemase; EC 5.1.99.1 from Pyrococcus horikoshii

52% id,
96% cov

EPI_CERS4 / Q3IZP4: Ethylmalonyl-CoA/methylmalonyl-CoA epimerase; EC 5.1.99.-; EC 5.1.99.1 from Cereibacter sphaeroides

38% id,
96% cov

Msed_0639 / A4YEG2: methylmalonyl-CoA epimerase monomer (EC 5.1.99.1) from Metallosphaera sedula
A4YEG2: methylmalonyl-CoA epimerase (EC 5.1.99.1) from Metallosphaera sedula

38% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory