Curated BLAST for Genomes

 

Curated BLAST

Searching in Alkalihalobacterium alkalinitrilicum DSM 22532 (GCF_002019605.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Alkalihalobacterium alkalinitrilicum DSM 22532, or try another query

pabA BK574_RS17790 WP_078429471.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

60% id,
100% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

57% id,
100% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

49% id,
99% cov

BK574_RS23580 WP_075385892.1: carbamoyl phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

31% id,
88% cov

guaA BK574_RS16195 WP_078429315.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

35% id,
79% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

28% id,
96% cov

BK574_RS26020 WP_078430671.1: carbamoyl phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

32% id,
80% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory