Curated BLAST for Genomes

 

Curated BLAST

Searching in Alkalihalobacterium alkalinitrilicum DSM 22532 (GCF_002019605.1)

Found 2 curated entries in PaperBLAST's database that match 'acetohydroxy acid synthase%large' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Alkalihalobacterium alkalinitrilicum DSM 22532, or try another query

ilvB BK574_RS22730 WP_078430191.1: acetolactate synthase large subunit
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

68% id,
98% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

49% id,
95% cov

BK574_RS08995 WP_078428364.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

28% id,
96% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

29% id,
54% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

27% id,
32% cov

BK574_RS14535 WP_078429110.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

26% id,
97% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

25% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory