Curated BLAST for Genomes

 

Curated BLAST

Searching in Pantoea rwandensis LMG 26275 (GCF_002095475.1)

Found 7 curated entries in PaperBLAST's database that match '4.2.1.116' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 40 relevant proteins in Pantoea rwandensis LMG 26275, or try another query

HA51_RS04965 HA51_04915 WP_084932587.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

38% id,
96% cov

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

34% id,
96% cov

acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi

33% id,
97% cov

More...

HA51_RS05000 HA51_04950 WP_084932602.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi

32% id,
95% cov

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

31% id,
81% cov

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

31% id,
75% cov

More...

fadB HA51_RS26560 HA51_26255 WP_084938412.1: fatty acid oxidation complex subunit alpha FadB
is similar to:
PaperBLAST

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

40% id,
72% cov

acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi

35% id,
77% cov

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

30% id,
84% cov

More...

fadJ HA51_RS11045 HA51_10915 WP_084934563.1: fatty acid oxidation complex subunit alpha FadJ
is similar to:
PaperBLAST

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

43% id,
66% cov

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

34% id,
73% cov

acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi

34% id,
72% cov

More...

HA51_RS08785 HA51_08675 WP_034821448.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

28% id,
78% cov

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

31% id,
9% cov

fabG HA51_RS14510 HA51_14330 WP_084935308.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

36% id,
25% cov

HA51_RS14265 HA51_14085 WP_084935266.1: 3-ketoacyl-ACP reductase FabG2
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

34% id,
26% cov

HA51_RS08255 HA51_08165 WP_084934100.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

32% id,
25% cov

HA51_RS04125 HA51_04085 WP_084932249.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

32% id,
25% cov

HA51_RS04600 HA51_04550 WP_084932425.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

28% id,
28% cov

HA51_RS04820 HA51_04770 WP_084932524.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

30% id,
26% cov

HA51_RS08400 HA51_08305 WP_084934079.1: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

29% id,
26% cov

HA51_RS00225 HA51_00225 WP_084931116.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

30% id,
25% cov

HA51_RS23715 HA51_23435 WP_084937586.1: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

30% id,
26% cov

HA51_RS25235 HA51_24955 WP_084938193.1: GolD/DthD family dehydrogenase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

29% id,
26% cov

HA51_RS04760 HA51_04710 WP_084932495.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

30% id,
25% cov

HA51_RS01220 HA51_01205 WP_084931381.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

34% id,
22% cov

HA51_RS03490 HA51_03485 WP_084931888.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

27% id,
27% cov

HA51_RS03185 HA51_03175 WP_084931824.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

31% id,
24% cov

HA51_RS04765 HA51_04715 WP_084932498.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

28% id,
26% cov

HA51_RS00300 HA51_00300 WP_084931131.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

29% id,
25% cov

HA51_RS03180 HA51_03170 WP_084931823.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

27% id,
26% cov

HA51_RS04535 HA51_04485 WP_084932400.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

38% id,
19% cov

kduD HA51_RS19725 HA51_19475 WP_084936278.1: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

26% id,
27% cov

HA51_RS07755 HA51_07665 WP_084933969.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

26% id,
27% cov

HA51_RS22390 HA51_22125 WP_084936983.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

26% id,
26% cov

HA51_RS08700 HA51_08595 WP_084934146.1: YciK family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

27% id,
25% cov

HA51_RS02090 HA51_02085 WP_084931632.1: oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

27% id,
25% cov

HA51_RS03820 HA51_03795 WP_084932126.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

33% id,
20% cov

HA51_RS25210 HA51_24930 WP_084938178.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

32% id,
19% cov

HA51_RS15980 HA51_15765 WP_084935607.1: oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

30% id,
20% cov

HA51_RS16820 HA51_16595 WP_084935760.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

30% id,
20% cov

HA51_RS03100 HA51_03090 WP_245840132.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

30% id,
18% cov

HA51_RS07765 HA51_07675 WP_084933971.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

26% id,
20% cov

HA51_RS01625 HA51_01610 WP_139810610.1: non-ribosomal peptide synthetase/type I polyketide synthase
is similar to:
PaperBLAST

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

23% id,
22% cov

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

25% id,
14% cov

HA51_RS15210 HA51_15000 WP_084935462.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

22% id,
22% cov

HA51_RS00730 HA51_00715 WP_084931207.1: SDR family oxidoreductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

26% id,
16% cov

HA51_RS09490 HA51_09380 WP_084934290.1: enterobactin synthase subunit F
is similar to:
PaperBLAST

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

28% id,
10% cov

fadD HA51_RS10660 HA51_10530 WP_139810667.1: long-chain-fatty-acid--CoA ligase FadD
is similar to:
PaperBLAST

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

25% id,
8% cov

HA51_RS27700 WP_281253441.1: AMP-binding protein
is similar to:
PaperBLAST

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

25% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 38 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

31043-32401 (frame +2) on NZ_MLFR01000022.1 Pantoea rwandensis strain LMG 26275 Contig0022_, whole genome shotgun sequence
is similar to:
PaperBLAST

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus
Also see hits to annotated proteins above

34% id,
24% cov

30424-31056 (frame +1) on NZ_MLFR01000022.1 Pantoea rwandensis strain LMG 26275 Contig0022_, whole genome shotgun sequence
is similar to:
PaperBLAST

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus
Also see hits to annotated proteins above

33% id,
9% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory