Curated BLAST
Searching in Pantoea rwandensis LMG 26275 (GCF_002095475.1)
Found 10 curated entries in PaperBLAST's database that match '4.2.1.150' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pantoea rwandensis LMG 26275, or try another query
HA51_RS04965 HA51_04915 WP_084932587.1: enoyl-CoA hydratase/isomerase family protein is similar to: | PaperBLAST |
crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri | 35% id, 98% cov |
CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei | 33% id, 97% cov |
ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus | 38% id, 85% cov |
CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum | 32% id, 95% cov |
Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula | 36% id, 38% cov |
More... |
fadJ HA51_RS11045 HA51_10915 WP_084934563.1: fatty acid oxidation complex subunit alpha FadJ is similar to: | PaperBLAST |
crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri | 41% id, 71% cov |
CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei | 37% id, 76% cov |
CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum | 37% id, 69% cov |
ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus | 32% id, 64% cov |
Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula | 31% id, 57% cov |
Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula | 35% id, 25% cov |
More... |
fadB HA51_RS26560 HA51_26255 WP_084938412.1: fatty acid oxidation complex subunit alpha FadB is similar to: | PaperBLAST |
crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri | 38% id, 76% cov |
CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei | 33% id, 84% cov |
CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum | 33% id, 82% cov |
ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus | 29% id, 73% cov |
Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula | 34% id, 54% cov |
Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula | 33% id, 29% cov |
More... |
HA51_RS05000 HA51_04950 WP_084932602.1: enoyl-CoA hydratase/isomerase family protein is similar to: | PaperBLAST |
CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum | 29% id, 95% cov |
crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri | 29% id, 95% cov |
CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei | 28% id, 95% cov |
ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus | 29% id, 81% cov |
Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula | 27% id, 32% cov |
More... |
HA51_RS08785 HA51_08675 WP_034821448.1: crotonase/enoyl-CoA hydratase family protein is similar to: | PaperBLAST |
CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei | 27% id, 68% cov |
crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri | 36% id, 39% cov |
CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum | 33% id, 38% cov |
ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus | 39% id, 29% cov |
Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula | 30% id, 28% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory