Searching in Marivita geojedonensis DPG-138 (GCF_002115805.1)
Found 27 curated entries in PaperBLAST's database that match '1.13.11.52' as complete word(s).
These curated entries have 24 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Marivita geojedonensis DPG-138, or try another query
| kynA MGEO_RS16405 MGEO_16320 WP_085640327.1: tryptophan 2,3-dioxygenase is similar to: | PaperBLAST |
Q8PDA8: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Xanthomonas campestris | 47% id, 91% cov |
P20351: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Drosophila melanogaster | 33% id, 57% cov |
P48775: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Homo sapiens | 33% id, 51% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 63699-64757 (frame +3) on NZ_JFKC01000020.1 Marivita geojedonensis strain DPG-138 contig20, whole genome shotgun sequence is similar to: | PaperBLAST |
Q8PDA8: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Xanthomonas campestris | 46% id, 94% cov |
Lawrence Berkeley National Laboratory