Curated BLAST for Genomes

 

Curated BLAST

Searching in Marivita geojedonensis DPG-138 (GCF_002115805.1)

Found 5 curated entries in PaperBLAST's database that match '3.1.1.24' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Marivita geojedonensis DPG-138, or try another query

pcaD MGEO_RS08365 MGEO_08335 WP_085636264.1: 3-oxoadipate enol-lactonase
is similar to:
PaperBLAST

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

39% id,
99% cov

pcaD / Q88N36: subunit of 3-oxoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas putida
Q88N36: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Pseudomonas putida

39% id,
98% cov

Q13KT2: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Paraburkholderia xenovorans

38% id,
100% cov

More...

pcaD MGEO_RS15960 MGEO_15875 WP_085640078.1: 3-oxoadipate enol-lactonase
is similar to:
PaperBLAST

pcaD / Q88N36: subunit of 3-oxoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas putida
Q88N36: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Pseudomonas putida

39% id,
95% cov

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

39% id,
92% cov

Q13KT2: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Paraburkholderia xenovorans

36% id,
97% cov

More...

MGEO_RS07760 MGEO_07725 WP_085636162.1: alpha/beta fold hydrolase
is similar to:
PaperBLAST

Q13KT2: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Paraburkholderia xenovorans

27% id,
97% cov

MGEO_RS11050 MGEO_11000 WP_158091010.1: alpha/beta fold hydrolase
is similar to:
PaperBLAST

Q13KT2: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Paraburkholderia xenovorans

25% id,
98% cov

MGEO_RS19415 MGEO_19315 WP_233140021.1: alpha/beta fold hydrolase
is similar to:
PaperBLAST

Q13KT2: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Paraburkholderia xenovorans

23% id,
99% cov

pcaC MGEO_RS15955 MGEO_15870 WP_085640075.1: 4-carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

47% id,
30% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory