Searching in Marivita geojedonensis DPG-138 (GCF_002115805.1)
Found 52 curated entries in PaperBLAST's database that match '3.1.3.3' as complete word(s).
These curated entries have 39 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Marivita geojedonensis DPG-138, or try another query
serB MGEO_RS02180 MGEO_02165 WP_085635040.1: phosphoserine phosphatase SerB is similar to: | PaperBLAST |
SERB_STRT2 / Q5M3B3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Streptococcus thermophilus | 44% id, 94% cov |
SERB_POLSJ / Q12A06: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Polaromonas sp. | 46% id, 89% cov |
SERB_LACLA / Q9CHW3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Lactococcus lactis | 41% id, 97% cov |
serA MGEO_RS02170 MGEO_02155 WP_085635038.1: phosphoglycerate dehydrogenase is similar to: | PaperBLAST |
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis | 36% id, 52% cov |
MGEO_RS12740 MGEO_12685 WP_085638251.1: SpoIIE family protein phosphatase is similar to: | PaperBLAST |
O07014: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis | 23% id, 67% cov |
MGEO_RS14935 MGEO_14855 WP_085639493.1: D-glycerate dehydrogenase is similar to: | PaperBLAST |
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis | 28% id, 48% cov |
MGEO_RS15775 MGEO_15690 WP_085639970.1: TIGR01459 family HAD-type hydrolase is similar to: | PaperBLAST |
PSP_BACSU / P94512: Phosphoserine phosphatase; PSP; EC 3.1.3.3 from Bacillus subtilis | 37% id, 25% cov |
MGEO_RS00100 MGEO_00100 WP_085634668.1: glyoxylate/hydroxypyruvate reductase A is similar to: | PaperBLAST |
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis | 32% id, 23% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
435143-436831 (frame -3) on NZ_JFKC01000001.1 Marivita geojedonensis strain DPG-138 contig1, whole genome shotgun sequence is similar to: | PaperBLAST |
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis | 35% id, 58% cov |
Lawrence Berkeley National Laboratory