Curated BLAST for Genomes

 

Curated BLAST

Searching in Marivita geojedonensis DPG-138 (GCF_002115805.1)

Found 69 curated entries in PaperBLAST's database that match '3.2.1.86' as complete word(s).

These curated entries have 47 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Marivita geojedonensis DPG-138, or try another query

MGEO_RS13930 MGEO_13865 WP_085638906.1: GH1 family beta-glucosidase
is similar to:
PaperBLAST

AHL67640.1: 6-P-β-galactosidase (Gan1D) (EC 3.2.1.86)
W8QF82: 6-phospho-beta-galactosidase (EC 3.2.1.85); 6-phospho-beta-glucosidase (EC 3.2.1.86) from Geobacillus stearothermophilus

38% id,
96% cov

BAD77499.1: 6-phospho-β-glycosidase (GK3214) (EC 3.2.1.85|3.2.1.86)

37% id,
96% cov

AAK78365.1: CAC0385 (EC 3.2.1.86)

35% id,
97% cov

More...

MGEO_RS13965 MGEO_13900 WP_085638927.1: alpha-glucosidase/alpha-galactosidase
is similar to:
PaperBLAST

Q9AI65: alpha-glucosidase (EC 3.2.1.20); 6-phospho-beta-glucosidase (EC 3.2.1.86) from Erwinia rhapontici

28% id,
97% cov

BAB35863.1: 6-P-β-glucosidase (ChbF;ECs2440) (EC 3.2.1.86)

25% id,
99% cov

CHBF_ECOLI / P17411: 6-phospho-beta-glucosidase; Cellobiose-6-phosphate hydrolase; Phospho-chitobiase; EC 3.2.1.86 from Escherichia coli
YdjD / b1734: monoacetylchitobiose-6-phosphate hydrolase (EC 3.2.1.86) from Escherichia coli
AAC74804.1: 6-P-β-glucosidase (CelF) (EC 3.2.1.86)
chbF: 6-phospho-beta-glucosidase; EC 3.2.1.86 from Escherichia coli
chbF / P17411: monoacetylchitobiose-6-phosphate hydrolase (EC 3.2.1.86) from Escherichia coli

25% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory