Curated BLAST for Genomes

 

Curated BLAST

Searching in Marivita geojedonensis DPG-138 (GCF_002115805.1)

Found 8 curated entries in PaperBLAST's database that match '3.5.1.16' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Marivita geojedonensis DPG-138, or try another query

argE MGEO_RS10755 MGEO_10705 WP_085637148.1: acetylornithine deacetylase
is similar to:
PaperBLAST

Q92Y75: acetylornithine deacetylase (EC 3.5.1.16) from Sinorhizobium meliloti

38% id,
99% cov

ARGE_ECOLI / P23908: Acetylornithine deacetylase; AO; Acetylornithinase; N-acetylornithinase; NAO; EC 3.5.1.16 from Escherichia coli
ArgE / b3957: acetylornithine deacetylase (EC 3.5.1.16) from Escherichia coli
argE / P23908: acetylornithine deacetylase (EC 3.5.1.16) from Escherichia coli

36% id,
92% cov

argE / Q8P8J5: acetylcitrulline deacetylase subunit (EC 3.5.1.16) from Xanthomonas campestris

29% id,
98% cov

argE MGEO_RS13260 MGEO_13205 WP_085638538.1: acetylornithine deacetylase
is similar to:
PaperBLAST

Q92Y75: acetylornithine deacetylase (EC 3.5.1.16) from Sinorhizobium meliloti

38% id,
98% cov

ARGE_ECOLI / P23908: Acetylornithine deacetylase; AO; Acetylornithinase; N-acetylornithinase; NAO; EC 3.5.1.16 from Escherichia coli
ArgE / b3957: acetylornithine deacetylase (EC 3.5.1.16) from Escherichia coli
argE / P23908: acetylornithine deacetylase (EC 3.5.1.16) from Escherichia coli

31% id,
97% cov

argE / Q8P8J5: acetylcitrulline deacetylase subunit (EC 3.5.1.16) from Xanthomonas campestris

36% id,
21% cov

argE MGEO_RS05565 MGEO_05545 WP_085635729.1: acetylornithine deacetylase
is similar to:
PaperBLAST

Q92Y75: acetylornithine deacetylase (EC 3.5.1.16) from Sinorhizobium meliloti

36% id,
97% cov

ARGE_ECOLI / P23908: Acetylornithine deacetylase; AO; Acetylornithinase; N-acetylornithinase; NAO; EC 3.5.1.16 from Escherichia coli
ArgE / b3957: acetylornithine deacetylase (EC 3.5.1.16) from Escherichia coli
argE / P23908: acetylornithine deacetylase (EC 3.5.1.16) from Escherichia coli

31% id,
99% cov

Q9C5C4: acetylornithine deacetylase (EC 3.5.1.16) from Arabidopsis thaliana

25% id,
48% cov

More...

MGEO_RS01485 MGEO_01475 WP_085634918.1: acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein
is similar to:
PaperBLAST

Q92Y75: acetylornithine deacetylase (EC 3.5.1.16) from Sinorhizobium meliloti

29% id,
87% cov

ARGE_DICDI / P54638: Acetylornithine deacetylase; N-acetylornithinase; AO; Acetylornithinase; NAO; EC 3.5.1.16 from Dictyostelium discoideum

27% id,
52% cov

dapE MGEO_RS10155 MGEO_10105 WP_085636728.1: succinyl-diaminopimelate desuccinylase
is similar to:
PaperBLAST

Q92Y75: acetylornithine deacetylase (EC 3.5.1.16) from Sinorhizobium meliloti

26% id,
84% cov

Q9C5C4: acetylornithine deacetylase (EC 3.5.1.16) from Arabidopsis thaliana

27% id,
43% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory